Dashboard

Column

Screened (Target): 1318 (1500)

Enrolled (Target): 513 (609)

Average screened per month

137

Average enrolled per month

43

Column

Study Flow & Monthly Cascade (Cumulative Numbers), Updated on 2023-05-16

Daily trend of screening and enrollment

Monthly trend of screening and enrollment

Column

Follow-up status at enroll and follow-up visits (Cumulative Numbers)

Follow-up status by number of visits (Head count)

% of number of visits at each follow-up month

Study Data

Column

Characteristics

GeneXpert Results

Column

LTFU by months & visits

Missing AGE

Missing SEX

# A tibble: 3 × 2
  pid     sex  
  <chr>   <chr>
1 TSH0708 <NA> 
2 TSH0713 <NA> 
3 TSH0762 <NA> 

Missing HIV Status

R Session Info

R version 4.2.2 (2022-10-31)
Platform: aarch64-apple-darwin20 (64-bit)
Running under: macOS Ventura 13.3.1

Matrix products: default
BLAS:   /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRblas.0.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] flexdashboard_0.6.1 glue_1.6.2          sjlabelled_1.2.0   
 [4] gtsummary_1.7.0     lubridate_1.9.2     forcats_1.0.0      
 [7] stringr_1.5.0       dplyr_1.1.1         purrr_1.0.1        
[10] readr_2.1.4         tidyr_1.3.0         tibble_3.2.1       
[13] ggplot2_3.4.1.9000  tidyverse_1.3.2    

loaded via a namespace (and not attached):
 [1] googledrive_2.0.0    colorspace_2.1-0     ellipsis_0.3.2      
 [4] rio_0.5.29           rprojroot_2.0.3      snakecase_0.11.0    
 [7] flextable_0.8.5      base64enc_0.1-3      fs_1.6.1            
[10] rstudioapi_0.14      httpcode_0.3.0       farver_2.1.1        
[13] DT_0.27              fansi_1.0.4          xml2_1.3.3          
[16] cachem_1.0.7         knitr_1.42           jsonlite_1.8.4      
[19] gt_0.8.0             broom_1.0.4          dbplyr_2.3.0        
[22] ggprism_1.0.4        shiny_1.7.4          compiler_4.2.2      
[25] httr_1.4.4           backports_1.4.1      assertthat_0.2.1    
[28] fastmap_1.1.1        lazyeval_0.2.2       gargle_1.3.0        
[31] cli_3.6.1            later_1.3.0          htmltools_0.5.5     
[34] tools_4.2.2          gtable_0.3.3         Rcpp_1.0.10         
[37] cellranger_1.1.0     jquerylib_0.1.4      vctrs_0.6.1         
[40] crul_1.3             broom.helpers_1.11.0 crosstalk_1.2.0     
[43] insight_0.19.0       xfun_0.37            openxlsx_4.2.5.1    
[46] rvest_1.0.3          timechange_0.2.0     mime_0.12           
[49] lifecycle_1.0.3      googlesheets4_1.0.1  scales_1.2.1        
[52] hms_1.1.2            promises_1.2.0.1     yaml_2.3.7          
[55] curl_5.0.0           memoise_2.0.1        gdtools_0.3.0       
[58] sass_0.4.5           stringi_1.7.12       highr_0.10          
[61] zip_2.2.2            rlang_1.1.0.9000     pkgconfig_2.0.3     
[64] systemfonts_1.0.4    evaluate_0.20        htmlwidgets_1.6.1   
[67] labeling_0.4.2       tidyselect_1.2.0     here_1.0.1          
[70] magrittr_2.0.3       R6_2.5.1             generics_0.1.3      
[73] DBI_1.1.3            pillar_1.9.0         haven_2.5.1         
[76] foreign_0.8-84       withr_2.5.0          janitor_2.2.0       
[79] modelr_0.1.10        crayon_1.5.2         gfonts_0.2.0        
[82] uuid_1.1-0           utf8_1.2.3           plotly_4.10.1       
[85] tzdb_0.3.0           rmarkdown_2.20       officer_0.5.2       
[88] grid_4.2.2           readxl_1.4.2         data.table_1.14.6   
[91] reprex_2.0.2         digest_0.6.31        xtable_1.8-4        
[94] httpuv_1.6.9         openssl_2.0.5        munsell_0.5.0       
[97] viridisLite_0.4.1    bslib_0.4.2          askpass_1.1         
 package       * version    date (UTC) lib source
 askpass         1.1        2019-01-13 [1] CRAN (R 4.2.0)
 assertthat      0.2.1      2019-03-21 [1] CRAN (R 4.2.0)
 backports       1.4.1      2021-12-13 [1] CRAN (R 4.2.0)
 base64enc       0.1-3      2015-07-28 [1] CRAN (R 4.2.0)
 broom           1.0.4      2023-03-11 [1] CRAN (R 4.2.0)
 broom.helpers   1.11.0     2023-01-06 [1] CRAN (R 4.2.0)
 bslib           0.4.2      2022-12-16 [1] CRAN (R 4.2.0)
 cachem          1.0.7      2023-02-24 [1] CRAN (R 4.2.0)
 cellranger      1.1.0      2016-07-27 [1] CRAN (R 4.2.0)
 cli             3.6.1      2023-03-23 [1] CRAN (R 4.2.2)
 colorspace      2.1-0      2023-01-23 [1] CRAN (R 4.2.0)
 crayon          1.5.2      2022-09-29 [1] CRAN (R 4.2.0)
 crosstalk       1.2.0      2021-11-04 [1] CRAN (R 4.2.0)
 crul            1.3        2022-09-03 [1] CRAN (R 4.2.0)
 curl            5.0.0      2023-01-12 [1] CRAN (R 4.2.0)
 data.table      1.14.6     2022-11-16 [1] CRAN (R 4.2.2)
 DBI             1.1.3      2022-06-18 [1] CRAN (R 4.2.0)
 dbplyr          2.3.0      2023-01-16 [1] CRAN (R 4.2.0)
 digest          0.6.31     2022-12-11 [1] CRAN (R 4.2.0)
 dplyr         * 1.1.1      2023-03-22 [1] CRAN (R 4.2.0)
 DT              0.27       2023-01-17 [1] CRAN (R 4.2.0)
 ellipsis        0.3.2      2021-04-29 [1] CRAN (R 4.2.0)
 evaluate        0.20       2023-01-17 [1] CRAN (R 4.2.0)
 fansi           1.0.4      2023-01-22 [1] CRAN (R 4.2.0)
 farver          2.1.1      2022-07-06 [1] CRAN (R 4.2.0)
 fastmap         1.1.1      2023-02-24 [1] CRAN (R 4.2.0)
 flexdashboard * 0.6.1      2023-01-23 [1] CRAN (R 4.2.0)
 flextable       0.8.5      2023-01-29 [1] CRAN (R 4.2.0)
 forcats       * 1.0.0      2023-01-29 [1] CRAN (R 4.2.0)
 foreign         0.8-84     2022-12-06 [1] CRAN (R 4.2.0)
 fs              1.6.1      2023-02-06 [1] CRAN (R 4.2.0)
 gargle          1.3.0      2023-01-30 [1] CRAN (R 4.2.0)
 gdtools         0.3.0      2023-01-15 [1] CRAN (R 4.2.0)
 generics        0.1.3      2022-07-05 [1] CRAN (R 4.2.0)
 gfonts          0.2.0      2023-01-08 [1] CRAN (R 4.2.0)
 ggplot2       * 3.4.1.9000 2023-03-23 [1] Github (tidyverse/ggplot2@1d1f795)
 ggprism         1.0.4      2022-11-04 [1] CRAN (R 4.2.1)
 glue          * 1.6.2      2022-02-24 [1] CRAN (R 4.2.0)
 googledrive     2.0.0      2021-07-08 [1] CRAN (R 4.2.0)
 googlesheets4   1.0.1      2022-08-13 [1] CRAN (R 4.2.0)
 gt              0.8.0      2022-11-16 [1] CRAN (R 4.2.2)
 gtable          0.3.3      2023-03-21 [1] CRAN (R 4.2.0)
 gtsummary     * 1.7.0      2023-01-13 [1] CRAN (R 4.2.0)
 haven           2.5.1      2022-08-22 [1] CRAN (R 4.2.0)
 here            1.0.1      2020-12-13 [1] CRAN (R 4.2.0)
 highr           0.10       2022-12-22 [1] CRAN (R 4.2.0)
 hms             1.1.2      2022-08-19 [1] CRAN (R 4.2.0)
 htmltools       0.5.5      2023-03-23 [1] CRAN (R 4.2.2)
 htmlwidgets     1.6.1      2023-01-07 [1] CRAN (R 4.2.0)
 httpcode        0.3.0      2020-04-10 [1] CRAN (R 4.2.0)
 httpuv          1.6.9      2023-02-14 [1] CRAN (R 4.2.0)
 httr            1.4.4      2022-08-17 [1] CRAN (R 4.2.0)
 insight         0.19.0     2023-01-30 [1] CRAN (R 4.2.0)
 janitor         2.2.0      2023-02-02 [1] CRAN (R 4.2.2)
 jquerylib       0.1.4      2021-04-26 [1] CRAN (R 4.2.0)
 jsonlite        1.8.4      2022-12-06 [1] CRAN (R 4.2.0)
 knitr           1.42       2023-01-25 [1] CRAN (R 4.2.0)
 labeling        0.4.2      2020-10-20 [1] CRAN (R 4.2.0)
 later           1.3.0      2021-08-18 [1] CRAN (R 4.2.0)
 lazyeval        0.2.2      2019-03-15 [1] CRAN (R 4.2.0)
 lifecycle       1.0.3      2022-10-07 [1] CRAN (R 4.2.0)
 lubridate     * 1.9.2      2023-02-10 [1] CRAN (R 4.2.0)
 magrittr        2.0.3      2022-03-30 [1] CRAN (R 4.2.0)
 memoise         2.0.1      2021-11-26 [1] CRAN (R 4.2.0)
 mime            0.12       2021-09-28 [1] CRAN (R 4.2.0)
 modelr          0.1.10     2022-11-11 [1] CRAN (R 4.2.0)
 munsell         0.5.0      2018-06-12 [1] CRAN (R 4.2.0)
 officer         0.5.2      2023-01-27 [1] CRAN (R 4.2.0)
 openssl         2.0.5      2022-12-06 [1] CRAN (R 4.2.0)
 openxlsx        4.2.5.1    2022-10-24 [1] CRAN (R 4.2.0)
 pillar          1.9.0      2023-03-22 [1] CRAN (R 4.2.0)
 pkgconfig       2.0.3      2019-09-22 [1] CRAN (R 4.2.0)
 plotly          4.10.1     2022-11-07 [1] CRAN (R 4.2.0)
 promises        1.2.0.1    2021-02-11 [1] CRAN (R 4.2.0)
 purrr         * 1.0.1      2023-01-10 [1] CRAN (R 4.2.0)
 R6              2.5.1      2021-08-19 [1] CRAN (R 4.2.0)
 Rcpp            1.0.10     2023-01-22 [1] CRAN (R 4.2.0)
 readr         * 2.1.4      2023-02-10 [1] CRAN (R 4.2.0)
 readxl          1.4.2      2023-02-09 [1] CRAN (R 4.2.0)
 reprex          2.0.2      2022-08-17 [1] CRAN (R 4.2.0)
 rio             0.5.29     2021-11-22 [1] CRAN (R 4.2.0)
 rlang           1.1.0.9000 2023-03-23 [1] Github (tidyverse/rlang@ea2fe5f)
 rmarkdown       2.20       2023-01-19 [1] CRAN (R 4.2.0)
 rprojroot       2.0.3      2022-04-02 [1] CRAN (R 4.2.0)
 rstudioapi      0.14       2022-08-22 [1] CRAN (R 4.2.0)
 rvest           1.0.3      2022-08-19 [1] CRAN (R 4.2.0)
 sass            0.4.5      2023-01-24 [1] CRAN (R 4.2.0)
 scales          1.2.1      2022-08-20 [1] CRAN (R 4.2.0)
 sessioninfo     1.2.2      2021-12-06 [1] CRAN (R 4.2.0)
 shiny           1.7.4      2022-12-15 [1] CRAN (R 4.2.2)
 sjlabelled    * 1.2.0      2022-04-10 [1] CRAN (R 4.2.0)
 snakecase       0.11.0     2019-05-25 [1] CRAN (R 4.2.0)
 stringi         1.7.12     2023-01-11 [1] CRAN (R 4.2.0)
 stringr       * 1.5.0      2022-12-02 [1] CRAN (R 4.2.2)
 systemfonts     1.0.4      2022-02-11 [1] CRAN (R 4.2.0)
 tibble        * 3.2.1      2023-03-20 [1] CRAN (R 4.2.0)
 tidyr         * 1.3.0      2023-01-24 [1] CRAN (R 4.2.0)
 tidyselect      1.2.0      2022-10-10 [1] CRAN (R 4.2.0)
 tidyverse     * 1.3.2      2022-07-18 [1] CRAN (R 4.2.0)
 timechange      0.2.0      2023-01-11 [1] CRAN (R 4.2.0)
 tzdb            0.3.0      2022-03-28 [1] CRAN (R 4.2.0)
 utf8            1.2.3      2023-01-31 [1] CRAN (R 4.2.0)
 uuid            1.1-0      2022-04-19 [1] CRAN (R 4.2.0)
 vctrs           0.6.1      2023-03-22 [1] CRAN (R 4.2.0)
 viridisLite     0.4.1      2022-08-22 [1] CRAN (R 4.2.0)
 withr           2.5.0      2022-03-03 [1] CRAN (R 4.2.0)
 xfun            0.37       2023-01-31 [1] CRAN (R 4.2.0)
 xml2            1.3.3      2021-11-30 [1] CRAN (R 4.2.0)
 xtable          1.8-4      2019-04-21 [1] CRAN (R 4.2.0)
 yaml            2.3.7      2023-01-23 [1] CRAN (R 4.2.0)
 zip             2.2.2      2022-10-26 [1] CRAN (R 4.2.0)

 [1] /Library/Frameworks/R.framework/Versions/4.2-arm64/Resources/library